gene detail

Gene description

TAIR ID: AT5G50570

Short description: Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein

Pathogen responsiveness: 0.10

General responsiveness: -1.14

Orthologous

Rice:

OS08G0531600

Maize:

GRMZM2G061734

Wheat:

TAAFFX.4913.1.S1_AT

GO biological process

anther development, regulation of transcription, DNA-templated

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF03110, SBP domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

22 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.97	4.58E-07
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.82	3.53E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.55	1.96E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.38	7.42E-11
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.79	2.65E-05
GSE21920	Col, ulp1, mock	Col, ulp1, Pto 6 h	1.71	3.05E-04
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.92	4.36E-11
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.97	1.19E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	1.88	8.31E-06
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.11	1.70E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.82	1.36E-06
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	3.19	2.51E-15
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.69	8.60E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.63	2.21E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.91	2.25E-13
GSE56094	Col, WT, control 5 h	Col, WT, PstDC3000 5 h	1.76	2.49E-05
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	1.97	9.08E-07
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.33	1.01E-08
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.55	1.25E-04
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	3.18	1.40E-14
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.92	5.61E-07
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.13	4.92E-04