gene detail

Gene description

TAIR ID: AT5G50390

Short description: Pentatricopeptide repeat (PPR-like) superfamily protein

Pathogen responsiveness: -2.42

General responsiveness: -2.25

Orthologous

Rice:

OS08G0138600

Maize:

GRMZM2G064501

Wheat: No orthologous gene

GO biological process

RNA modification

GO cellular component

chloroplast, intracellular membrane-bounded organelle

GO molecular function

zinc ion binding, RNA binding, endonuclease activity

Protein domain

Pfam	PF13041, PPR repeat family
Pfam	PF01535, PPR repeat
Pfam	PF14432, DYW family of nucleic acid deaminases

Metabolic pathway

PWY-3781: aerobic respiration (cytochrome c)

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.96	5.88E-03