Gene: AT5G49660
     


Gene description


TAIR ID: AT5G49660

Short description: Leucine-rich repeat transmembrane protein kinase family protein

Pathogen responsiveness: -1.01

General responsiveness: -1.74

Orthologous


Rice:

OS12G0632900   OS04G0576900  

Maize:

GRMZM2G080503  

Wheat: No orthologous gene

GO biological process


positive regulation of lateral root development, regulation of lignin biosynthetic process, nitrate import, regulation of root development, response to nitrate starvation, regulation of secondary cell wall biogenesis, regulation of shoot system development, regulation of lateral root development, regulation of anthocyanin biosynthetic process, lateral root formation, xylem and phloem pattern formation


GO cellular component


plasma membrane, integral component of membrane


GO molecular function


transmembrane receptor protein tyrosine kinase activity, peptide binding, protein serine/threonine kinase activity, ATP binding, peptide receptor activity, kinase activity


Protein domain


PfamPF08263, Leucine rich repeat N-terminal domain
PfamPF13855, Leucine rich repeat
PfamPF00069, Protein kinase domain
SMARTSM00220, S_TKc
SMARTSM00365, LRR_SD22
SMARTSM00369, LRR_TYP

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


No regulation information

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.621.96E-02
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.576.91E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.566.28E-09






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