Gene: AT5G49520
     

Gene description


TAIR ID: AT5G49520

Short description: WRKY DNA-binding protein 48

Pathogen responsiveness: 1.31

General responsiveness: 1.18

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G151763  

Wheat: No orthologous gene

GO biological process


response to bacterium, defense response to bacterium, regulation of transcription, DNA-templated, transcription, response to chitin, positive regulation of transcription


GO cellular component


nucleus


GO molecular function


sequence-specific DNA binding, transcription factor activity


Protein domain


PfamPF03106, WRKY DNA -binding domain
SMARTSM00774, WRKY

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G11260, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


45 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.848.33E-04
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.613.45E-05
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.173.27E-14
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d2.101.75E-13
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.753.58E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min3.451.97E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.881.60E-09
GSE17464Laer, controlLaer, PstDC3000 12 h-1.566.47E-04
GSE17464Laer, controlLaer, Flg22 1 h1.922.26E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.622.08E-08
GSE17464Penta, controlPenta, PstDC3000 12 h-1.921.98E-05
GSE17464Penta, controlPenta, Flg22 2 h1.691.59E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.933.27E-07
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min2.172.21E-05
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.202.25E-05
GSE37921Col, WT, controlCol, WT, CMV1.616.00E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.063.30E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.703.65E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.337.98E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.092.90E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.893.66E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.403.36E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.003.09E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.436.94E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.598.33E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.321.02E-12
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.952.46E-03
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.305.27E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.041.74E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.645.17E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.632.94E-02
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h1.655.08E-06
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.682.80E-06
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h1.592.92E-05
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.721.22E-08
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h3.435.10E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h3.745.95E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.515.10E-05
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.155.18E-14
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h4.227.28E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.665.54E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min4.501.17E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h3.414.68E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.587.45E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min3.711.19E-04






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.