Gene: AT5G48655
     

Gene description


TAIR ID: AT5G48655

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -1.20

General responsiveness: -1.79

GO biological process


response to chitin


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 1 h1.514.46E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.106.71E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.882.01E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.792.06E-08
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.711.03E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.662.57E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.573.20E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.579.65E-16






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