gene detail

Gene description

TAIR ID: AT5G48230

Short description: acetoacetyl-CoA thiolase 2

Pathogen responsiveness: -2.25

General responsiveness: -0.29

Orthologous

Rice:

OS09G0252100

Maize:

GRMZM5G866758

Wheat: No orthologous gene

GO biological process

isoprenoid biosynthetic process, pollen germination, fatty acid beta-oxidation, pollen tube growth, sterol metabolic process, embryo development ending in seed dormancy

GO cellular component

peroxisome, cytosol, cytoplasm, plasma membrane

GO molecular function

acetyl-CoA C-acetyltransferase activity, metal ion binding

Protein domain

Pfam	PF00108, Thiolase, N-terminal domain
Pfam	PF02803, Thiolase, C-terminal domain

Metabolic pathway

PWY-922: mevalonate pathway I
ILEUDEG-PWY: isoleucine degradation I
PWY-5910: superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate)
LYSINE-DEG2-PWY: lysine degradation II

KEGG pathway

PATH:ath01200: Carbon metabolism
PATH:ath01212: Fatty acid metabolism
PATH:ath00620: Pyruvate metabolism
PATH:ath00630: Glyoxylate and dicarboxylate metabolism
PATH:ath00640: Propanoate metabolism
PATH:ath00650: Butanoate metabolism
PATH:ath00071: Fatty acid degradation
PATH:ath00072: Synthesis and degradation of ketone bodies
PATH:ath00280: Valine, leucine and isoleucine degradation
PATH:ath00310: Lysine degradation
PATH:ath00380: Tryptophan metabolism
PATH:ath00900: Terpenoid backbone biosynthesis

Transcriptional regulation

Regulator:
AT4G31800

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE26679_WT_GC view
GSE26679_EDR1_GC view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.58	3.59E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.55	2.76E-02