gene detail

Gene description

TAIR ID: AT5G47780

Short description: galacturonosyltransferase 4

Pathogen responsiveness: -0.92

General responsiveness: -2.24

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

pectin biosynthetic process, carbohydrate biosynthetic process, cell wall organization

GO cellular component

Golgi apparatus, Golgi membrane, integral component of membrane

GO molecular function

transferase activity, transferring glycosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity

Protein domain

Pfam	PF01501, Glycosyl transferase family 8

Metabolic pathway

PWY-1061: homogalacturonan biosynthesis

KEGG pathway

PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 2 h	-1.86	1.72E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-1.89	1.22E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.74	8.94E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.98	2.72E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.34	6.21E-07
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.89	4.03E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.61	3.45E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.55	2.19E-04