Gene: AT5G46860
     

Gene description


TAIR ID: AT5G46860

Short description: Syntaxin/t-SNARE family protein

Pathogen responsiveness: -1.48

General responsiveness: -1.86

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G017329   GRMZM2G120115  

Wheat: No orthologous gene

GO biological process


intracellular protein transport, amyloplast organization, membrane fusion, vesicle docking, vacuole organization, negative gravitropism, vesicle fusion, stomatal movement


GO cellular component


trans-Golgi network transport vesicle, late endosome membrane, SNARE complex, plant-type vacuole, late endosome, plant-type vacuole membrane, vacuole, integral component of membrane, Golgi apparatus


GO molecular function


SNARE binding, protein binding, SNAP receptor activity


Protein domain


PfamPF05739, SNARE domain
PfamPF14523, Syntaxin-like protein
SMARTSM00503, SynN
SMARTSM00397, t_SNARE

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G16110

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 58 (Top5%)

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.331.48E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.424.50E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.379.15E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.694.32E-14






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