Gene: AT5G46780
     


Gene description


TAIR ID: AT5G46780

Short description: VQ motif-containing protein

Pathogen responsiveness: -0.32

General responsiveness: 0.64

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


PfamPF05678, VQ motif

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G22300, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.584.32E-07
GSE2169Col, WT, waterCol, WT, chitin 30 min1.762.88E-10
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.885.68E-11
GSE2169Col, rre2, waterCol, rre2, chitin 30 min1.885.98E-11
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.517.91E-05
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.991.20E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.786.19E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.592.55E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.836.64E-12
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.962.28E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h1.664.27E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.698.32E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.842.95E-13
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.624.00E-11






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