Gene: AT5G45890
     


Gene description


TAIR ID: AT5G45890

Short description: senescence-associated gene 12

Pathogen responsiveness: -0.66

General responsiveness: -1.35

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G137690  

Wheat:

TAAFFX.51354.1.S1_AT  


GO biological process


proteolysis involved in cellular protein catabolic process, response to auxin, defense response to fungus, incompatible interaction, leaf senescence, response to cytokinin, response to fructose, response to sucrose, response to glucose, proteolysis, floral organ senescence, response to ethylene, aging, response to UV-B


GO cellular component


senescence-associated vacuole, lysosome, extracellular region, extracellular space


GO molecular function


cysteine-type endopeptidase activity, cysteine-type peptidase activity


Protein domain


PfamPF00112, Papain family cysteine protease
PfamPF08246, Cathepsin propeptide inhibitor domain (I29)
SMARTSM00848, Inhibitor_I29
SMARTSM00645, Pept_C1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G23810

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.531.60E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.683.74E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d2.754.16E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.002.31E-02
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-3.291.66E-03






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