gene detail

Gene description

TAIR ID: AT5G43780

Short description: Pseudouridine synthase/archaeosine transglycosylase-like family protein

Pathogen responsiveness: -1.54

General responsiveness: 0.86

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

hydrogen sulfide biosynthetic process, sulfate assimilation

GO cellular component

chloroplast stroma, mitochondrion, chloroplast

GO molecular function

adenylylsulfate kinase activity, ATP binding, sulfate adenylyltransferase (ATP) activity

Protein domain

Pfam	PF14306, PUA-like domain
Pfam	PF01747, ATP-sulfurylase

Metabolic pathway

SULFMETII-PWY: sulfate reduction II (assimilatory)
PWY-5340: sulfate activation for sulfonation
PWY-6932: selenate reduction

KEGG pathway

PATH:ath00920: Sulfur metabolism
PATH:ath00230: Purine metabolism
PATH:ath00450: Selenocompound metabolism
PATH:ath00261: Monobactam biosynthesis

Transcriptional regulation

Regulator:
AT5G61850, AT1G73730

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.69	3.75E-03
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.56	1.43E-02
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.04	3.15E-06