gene detail

Gene description

TAIR ID: AT5G43380

Short description: type one serine/threonine protein phosphatase 6

Pathogen responsiveness: -0.58

General responsiveness: -1.43

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein dephosphorylation

GO cellular component

nucleus, chloroplast

GO molecular function

protein serine/threonine phosphatase activity, metal ion binding, phosphoprotein phosphatase activity

Protein domain

Pfam	PF16891, Serine-threonine protein phosphatase N-terminal domain
Pfam	PF00149, Calcineurin-like phosphoesterase
SMART	SM00156, PP2Ac

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03015: mRNA surveillance pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

Coexpression network

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.65	3.17E-08
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.65	2.52E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.89	1.47E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.59	4.49E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.60	2.86E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.04	2.15E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.79	1.21E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.45	1.10E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	1.96	1.34E-02
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.55	1.89E-10
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.59	9.72E-11