Gene: AT5G43170
     


Gene description


TAIR ID: AT5G43170

Short description: zinc-finger protein 3

Pathogen responsiveness: 0.32

General responsiveness: -1.09

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


hyperosmotic salinity response, negative regulation of transcription, DNA-templated, response to cold, transcription, response to chitin


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding, metal ion binding


Protein domain


PfamPF13912, C2H2-type zinc finger
SMARTSM00355, ZnF_C2H2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G23810

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


35 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.936.63E-06
GSE17464Laer, controlLaer, PstDC3000 12 h-1.735.68E-05
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.061.49E-06
GSE17464Penta, controlPenta, PstDC3000 12 h-1.898.09E-06
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.286.20E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.009.92E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.991.45E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.543.65E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.612.66E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.923.91E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.634.81E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.133.65E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.853.79E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.931.72E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.446.79E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.036.93E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.833.00E-07
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.125.37E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.582.94E-06
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.004.36E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.554.59E-03
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.581.22E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.273.74E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.024.86E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.901.14E-11
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.036.84E-11
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.964.25E-11
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.651.10E-08
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.911.67E-11
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.643.93E-09
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.534.52E-07
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.641.29E-11
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.611.57E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.581.13E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.054.87E-03






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