gene detail

Gene description

TAIR ID: AT5G40300

Short description: Uncharacterised protein family (UPF0497)

Pathogen responsiveness: -1.78

General responsiveness: -1.46

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

membrane, nucleus, plasma membrane, integral component of membrane

GO molecular function

iron-sulfur cluster binding

Protein domain

Pfam	PF04535, Domain of unknown function (DUF588)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.60	5.67E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.55	1.16E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.86	5.53E-12