gene detail

Gene description

TAIR ID: AT5G39100

Short description: germin-like protein 6

Pathogen responsiveness: NA

General responsiveness: -1.15

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

cell wall, extracellular region, apoplast

GO molecular function

nutrient reservoir activity, manganese ion binding

Protein domain

Pfam	PF00190, Cupin
SMART	SM00835, Cupin_1

Metabolic pathway

DETOX1-PWY: superoxide radicals degradation

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G20770

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	3.93	1.18E-05
GSE17464	Laer, control	Laer, Flg22 1 h	1.91	3.31E-02
GSE17464	Laer, control	Laer, Flg22 2 h	1.73	4.88E-02
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.55	4.18E-03
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	2.05	1.28E-05
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	2.85	7.51E-08
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	1.79	1.76E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	2.97	1.39E-05
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	4.46	6.74E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	5.63	5.39E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	3.26	2.51E-02