gene detail

Gene description

TAIR ID: AT5G38910

Short description: RmlC-like cupins superfamily protein

Pathogen responsiveness: NA

General responsiveness: 1.32

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

apoplast, extracellular region

GO molecular function

nutrient reservoir activity, manganese ion binding

Protein domain

Pfam	PF00190, Cupin
SMART	SM00835, Cupin_1

Metabolic pathway

DETOX1-PWY: superoxide radicals degradation

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT3G24050, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_WT_GO view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	1.83	2.00E-09
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	1.97	7.54E-10
GSE26206	Col, WT, control	Col, WT, R.solani_AG2_1 7 d	2.91	1.61E-05
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	5.69	7.65E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.76	3.99E-02
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	3.07	4.82E-04
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	2.27	2.33E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.88	3.59E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	8.89	1.17E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	4.37	2.16E-02