Gene: AT5G38430
     

Gene description


TAIR ID: AT5G38430

Short description: Ribulose bisphosphate carboxylase (small chain) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


reductive pentose-phosphate cycle, photorespiration, response to blue light, oxidation-reduction process, response to red light, carbon fixation, response to far red light


GO cellular component


chloroplast stroma, thylakoid, apoplast, chloroplast, chloroplast membrane, chloroplast envelope, chloroplast ribulose bisphosphate carboxylase complex, membrane


GO molecular function


ribulose-bisphosphate carboxylase activity, monooxygenase activity


Protein domain


PfamPF12338, Ribulose-1,5-bisphosphate carboxylase small subunit
PfamPF00101, Ribulose bisphosphate carboxylase, small chain
SMARTSM00961, RuBisCO_small

Transcriptional regulation


Regulator:
AT2G02820, AT1G14350

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.012.02E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.211.15E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.279.88E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-2.182.37E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-4.967.72E-17
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.634.49E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-3.361.73E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.402.19E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-4.178.27E-13
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-2.123.70E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.963.26E-12
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.901.37E-03
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.891.41E-03
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-2.085.93E-04
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h-1.822.91E-03
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.906.33E-07
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.204.67E-08
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-2.241.36E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-3.421.56E-09
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.266.91E-05
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.971.08E-07
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.278.28E-05






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