Gene: AT5G29000
     

Gene description


TAIR ID: AT5G29000

Short description: Homeodomain-like superfamily protein

Pathogen responsiveness: -0.69

General responsiveness: -1.15

Orthologous


Rice:

OS03G0329900   OS08G0346500  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding


Protein domain


PfamPF14379, MYB-CC type transfactor, LHEQLE motif
PfamPF00249, Myb-like DNA-binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


No regulation information

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.191.74E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.881.29E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.361.53E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.706.66E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.194.13E-11
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.941.59E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.162.63E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.718.63E-11
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.034.51E-02






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