gene detail

Gene description

TAIR ID: AT5G27740

Short description: ATPase family associated with various cellular activities (AAA)

Pathogen responsiveness: -2.98

General responsiveness: -2.36

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G060924

Wheat:

TA.22929.2.S1_AT TA.22929.2.S1_S_AT

GO biological process

DNA-dependent DNA replication, translational elongation, embryo development ending in seed dormancy, DNA repair

GO cellular component

nucleus, ribosome, DNA replication factor C complex

GO molecular function

ATP binding, DNA clamp loader activity, structural constituent of ribosome, rRNA binding, translation elongation factor activity

Protein domain

Pfam	PF13177, DNA polymerase III, delta subunit
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03030: DNA replication
PATH:ath03420: Nucleotide excision repair
PATH:ath03430: Mismatch repair

Transcriptional regulation

Regulator:
AT2G36010, AT2G38250, AT5G02470

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.61	1.47E-02