Gene: AT5G27580
     


Gene description


TAIR ID: AT5G27580

Short description: AGAMOUS-like 89

Pathogen responsiveness: NA

General responsiveness: -5.94

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, positive regulation of transcription from RNA polymerase II promoter


GO cellular component


nucleus


GO molecular function


protein binding, core promoter proximal region sequence-specific DNA binding, transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding, protein dimerization activity, sequence-specific DNA binding


Protein domain


PfamPF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
SMARTSM00432, MADS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990, AT2G47190

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.012.60E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.