Gene: AT5G27070
     


Gene description


TAIR ID: AT5G27070

Short description: AGAMOUS-like 53

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of transcription from RNA polymerase II promoter, regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus, plasma membrane


GO molecular function


transcription factor activity, sequence-specific DNA binding, core promoter proximal region sequence-specific DNA binding, protein binding, RNA polymerase II core promoter proximal region sequence-specific binding, protein dimerization activity


Protein domain


PfamPF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
SMARTSM00432, MADS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT4G36990, AT2G47190

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.251.17E-02
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d2.962.93E-02






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