gene detail

Gene description

TAIR ID: AT5G26930

Short description: GATA transcription factor 23

Pathogen responsiveness: -1.72

General responsiveness: -1.20

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G052616

Wheat: No orthologous gene

GO biological process

lateral root development, cell differentiation, response to light stimulus

GO cellular component

nucleus, transcription factor complex

GO molecular function

RNA polymerase II regulatory region sequence-specific DNA binding, chromatin binding, transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding, transcription factor activity, sequence-specific DNA binding, RNA polymerase II transcription factor binding, zinc ion binding

Protein domain

Pfam	PF00320, GATA zinc finger
SMART	SM00401, ZnF_GATA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.85	2.30E-02
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.48	2.19E-03
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	1.91	2.45E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.90	1.71E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.00	4.62E-04
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.61	5.86E-05