gene detail

Gene description

TAIR ID: AT5G26880

Short description: AGAMOUS-like 26

Pathogen responsiveness: -1.48

General responsiveness: -2.42

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

RNA methylation, RNA processing, cellular response to nitrogen starvation

GO cellular component

chloroplast

GO molecular function

RNA methyltransferase activity, transcription factor activity, sequence-specific DNA binding, RNA binding

Protein domain

Pfam	PF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
Pfam	PF00588, SpoU rRNA Methylase family
SMART	SM00432, MADS

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

Coexpression network

Differentially expressed condition

7 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.84	2.06E-11
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.75	5.48E-12
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.72	3.74E-11
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.70	9.42E-11
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.67	2.03E-11
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.58	1.13E-10
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.77	1.64E-02

Showing 1 to 7 of 7 entries