gene detail

Gene description

TAIR ID: AT5G26667

Short description: P-loop containing nucleoside triphosphate hydrolases superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice:

OS02G0778400 OS07G0624700

Maize:

GRMZM5G801436

Wheat:

TA.2471.3.S1_A_AT TA.2471.3.S1_X_AT

GO biological process

'de novo' pyrimidine nucleobase biosynthetic process, pyrimidine nucleotide biosynthetic process, pyrimidine ribonucleoside monophosphate metabolic process

GO cellular component

nucleus, cytosol, cytoplasm, apoplast

GO molecular function

uridylate kinase activity, ATP binding, cytidylate kinase activity

Protein domain

Pfam	PF00406, Adenylate kinase

Metabolic pathway

PWY-7208: superpathway of pyrimidine nucleobases salvage
PWY0-162: superpathway of pyrimidine ribonucleotides de novo biosynthesis
PWY-7196: superpathway of pyrimidine ribonucleosides salvage
PWY-7200: superpathway of pyrimidine deoxyribonucleoside salvage
PWY-7176: UTP and CTP de novo biosynthesis
PWY-5687: pyrimidine ribonucleotides interconversion
PWY-7211: superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis
PWY-7197: pyrimidine deoxyribonucleotide phosphorylation
PWY-7205: CMP phosphorylation
PWY0-163: salvage pathways of pyrimidine ribonucleotides

KEGG pathway

PATH:ath00240: Pyrimidine metabolism

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.65	3.89E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.51	1.44E-10