gene detail

Gene description

TAIR ID: AT5G25250

Short description: SPFH/Band 7/PHB domain-containing membrane-associated protein family

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice:

OS10G0481500

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

cellular response to hypoxia, endocytosis, membrane invagination

GO cellular component

caveola, vacuole, vacuolar membrane, plasmodesma, plasma membrane, endosome

GO molecular function

molecular_function

Protein domain

Pfam	PF01145, SPFH domain / Band 7 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

28 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	2.47	8.89E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	3.17	8.29E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	3.52	3.00E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.98	1.49E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.19	2.51E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	6.97	1.43E-16
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	4.56	1.30E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	6.67	3.27E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	6.31	3.90E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	6.55	2.34E-16
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	6.72	1.70E-16
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	5.82	1.93E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.93	2.98E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	6.84	7.05E-14
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	5.81	2.87E-12
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	1.89	6.88E-07
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	3.63	2.46E-11
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	2.09	2.07E-07
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	4.20	3.37E-12
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.90	5.74E-06
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.52	3.32E-04
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.56	4.10E-04
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.99	2.73E-06
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.78	1.59E-10
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	1.94	3.37E-05
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	2.61	3.51E-08
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	1.65	2.62E-04
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.64	3.36E-04