Gene: AT5G24590
     

Gene description


TAIR ID: AT5G24590

Short description: TCV-interacting protein

Pathogen responsiveness: -0.23

General responsiveness: -0.32

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of defense response to virus by host, defense response to virus, multicellular organism development, regulation of transcription, DNA-templated, response to virus, response to molecule of bacterial origin, transcription, viral process


GO cellular component


integral component of membrane, nucleus, endomembrane system


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding, transcription coactivator activity, DNA binding


Protein domain


PfamPF02365, No apical meristem (NAM) protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G41070, AT2G36270, AT1G53160, AT5G18830

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


24 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.132.81E-02
GSE17464Laer, controlLaer, Flg22 1 h2.046.62E-08
GSE17464Penta, controlPenta, Flg22 2 h2.295.34E-09
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.613.24E-07
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.637.30E-07
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.752.42E-04
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.634.19E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.563.68E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.782.09E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.042.85E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.741.98E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.701.50E-09
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.642.85E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.132.12E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.771.24E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.552.25E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.772.49E-10
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.859.85E-11
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.634.47E-09
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.611.43E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.742.48E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.781.45E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.011.56E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.201.03E-03






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