Gene: AT5G23880
     

Gene description


TAIR ID: AT5G23880

Short description: cleavage and polyadenylation specificity factor 100

Pathogen responsiveness: -2.59

General responsiveness: -1.92

Orthologous


Rice:

OS09G0569400  

Maize:

GRMZM2G036050  

Wheat: No orthologous gene

GO biological process


embryo development ending in seed dormancy, mRNA cleavage, posttranscriptional gene silencing by RNA, mRNA polyadenylation


GO cellular component


nucleus, cytoplasm, plasmodesma


GO molecular function


protein binding, RNA binding


Protein domain


PfamPF16661, Metallo-beta-lactamase superfamily domain
PfamPF13299, Cleavage and polyadenylation factor 2 C-terminal
PfamPF07521, Zn-dependent metallo-hydrolase RNA specificity domain
PfamPF10996, Beta-Casp domain
SMARTSM01027, Beta-Casp
SMARTSM00849, Lactamase_B

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.