gene detail

Gene description

TAIR ID: AT5G23580

Short description: calmodulin-like domain protein kinase 9

Pathogen responsiveness: -1.64

General responsiveness: -1.96

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein autophosphorylation, protein phosphorylation, abscisic acid-activated signaling pathway, peptidyl-serine phosphorylation, intracellular signal transduction

GO cellular component

cytoplasm, nucleus

GO molecular function

calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity, ATP binding, calcium ion binding, kinase activity, calmodulin binding

Protein domain

Pfam	PF13499, EF-hand domain pair
Pfam	PF00069, Protein kinase domain
SMART	SM00220, S_TKc
SMART	SM00054, EFh

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.75	2.28E-12
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.10	6.37E-05