gene detail

Gene description

TAIR ID: AT5G23340

Short description: RNI-like superfamily protein

Pathogen responsiveness: -0.85

General responsiveness: -1.85

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

cytoplasm

GO molecular function

unkown

Protein domain

Pfam	PF13516, Leucine Rich repeat
SMART	SM00367, LRR_CC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

GSE56094_WT_HRPA- view
GSE5686_WT_GO view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.76	2.37E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.33	2.09E-17
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.81	5.27E-12
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.05	3.35E-14
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.19	6.03E-16
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	1.70	8.39E-11
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.87	3.66E-12
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.50	7.23E-05