gene detail

Gene description

TAIR ID: AT5G23130

Short description: Peptidoglycan-binding LysM domain-containing protein

Pathogen responsiveness: -1.95

General responsiveness: -1.94

Orthologous

Rice:

OS10G0485500

Maize:

GRMZM2G048559 GRMZM2G113781

Wheat:

TA.1559.1.S1_AT

GO biological process

cell wall macromolecule catabolic process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF01476, LysM domain
SMART	SM00257, LysM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT3G27920

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	1.60	1.92E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.77	2.04E-03