Gene: AT5G22800
     

Gene description


TAIR ID: AT5G22800

Short description: Alanyl-tRNA synthetase, class IIc

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G154664  

Wheat: No orthologous gene

GO biological process


alanyl-tRNA aminoacylation, embryo development ending in seed dormancy, tRNA modification


GO cellular component


chloroplast stroma, chloroplast, mitochondrion, integral component of membrane, membrane


GO molecular function


alanine-tRNA ligase activity, ATP binding, tRNA binding, amino acid binding, metal ion binding


Protein domain


PfamPF07973, Threonyl and Alanyl tRNA synthetase second additional domain
PfamPF01411, tRNA synthetases class II (A)
PfamPF02272, DHHA1 domain
SMARTSM00863, tRNA_SAD

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G56110, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


15 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.521.30E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.748.66E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.577.23E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.212.18E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.375.86E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.113.71E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.776.84E-15
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.991.44E-10
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.982.00E-13
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.514.86E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.976.98E-13
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.513.68E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.764.93E-11
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.662.67E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.571.68E-08






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