Gene: AT5G21170
     

Gene description


TAIR ID: AT5G21170

Short description: 5'-AMP-activated protein kinase beta-2 subunit protein

Pathogen responsiveness: -0.77

General responsiveness: -0.60

GO biological process


cellular response to nitrogen levels, fatty acid biosynthetic process, carbohydrate metabolic process, nitrate assimilation, phosphorylation


GO cellular component


cytoplasm


GO molecular function


AMP-activated protein kinase activity, ATP binding, kinase activity, protein binding, protein kinase regulator activity


Protein domain


PfamPF16561, Glycogen recognition site of AMP-activated protein kinase
PfamPF04739, 5'-AMP-activated protein kinase beta subunit, interaction domain
SMARTSM01010, AMPKBI

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.782.32E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.862.07E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.001.56E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.942.24E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-1.511.70E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.311.04E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.663.69E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.602.62E-10
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.571.56E-03






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