gene detail

Gene description

TAIR ID: AT5G20885

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -0.76

General responsiveness: -0.75

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

integral component of membrane

GO molecular function

unkown

Protein domain

Pfam	PF13639, Ring finger domain
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G73805, AT5G26920

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.73	2.03E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.10	2.82E-09
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.69	3.94E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.85	7.15E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.57	2.76E-03