gene detail

Gene description

TAIR ID: AT5G19210

Short description: P-loop containing nucleoside triphosphate hydrolases superfamily protein

Pathogen responsiveness: -1.07

General responsiveness: -1.19

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G415538

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

cytoplasm, chloroplast

GO molecular function

RNA binding, ATP-dependent helicase activity, ATP binding

Protein domain

Pfam	PF00270, DEAD/DEAH box helicase
Pfam	PF00271, Helicase conserved C-terminal domain
SMART	SM00490, HELICc
SMART	SM00487, DEXDc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G56110

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

4 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.19	7.17E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.53	4.49E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.04	1.79E-14
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-1.57	4.05E-04