gene detail

Gene description

TAIR ID: AT5G18810

Short description: SC35-like splicing factor 28

Pathogen responsiveness: -3.33

General responsiveness: -4.96

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

mRNA splicing, via spliceosome

GO cellular component

spliceosomal complex, nucleus, nuclear speck

GO molecular function

RNA binding, protein binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

Coexpression network

No coexpression gene

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.33	1.86E-03