gene detail

Gene description

TAIR ID: AT5G18680

Short description: tubby like protein 11

Pathogen responsiveness: -1.59

General responsiveness: -1.50

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, phosphoric diester hydrolase activity, phosphatidylinositol binding

Protein domain

Pfam	PF00646, F-box domain
Pfam	PF01167, Tub family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G41315, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.51	1.00E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.78	2.30E-15
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.52	1.59E-12