Gene: AT5G18340
     

Gene description


TAIR ID: AT5G18340

Short description: ARM repeat superfamily protein

Pathogen responsiveness: -1.30

General responsiveness: 0.20

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF04564, U-box domain
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G02820, AT4G36990, AT1G14350

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network


No coexpression gene


Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min-1.803.48E-02
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min-1.783.49E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.997.05E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.821.90E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h3.077.45E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.241.35E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.611.05E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h3.501.04E-07






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