Gene: AT5G17450
     


Gene description


TAIR ID: AT5G17450

Short description: Heavy metal transport/detoxification superfamily protein

Pathogen responsiveness: -0.31

General responsiveness: -0.62

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


detoxification of cadmium ion, cadmium ion homeostasis, cellular transition metal ion homeostasis, metal ion transport


GO cellular component


cytoplasm, membrane, nucleus


GO molecular function


metal ion binding, transition metal ion binding


Protein domain


PfamPF00403, Heavy-metal-associated domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.663.00E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.994.78E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.006.81E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.764.00E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.531.82E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.458.70E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.742.24E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV1.785.30E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.671.13E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.567.92E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.632.03E-09
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.578.29E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.834.26E-09
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.462.20E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.114.46E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.765.37E-17
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.663.15E-15
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.727.36E-16
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.632.90E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.782.44E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.