Gene: AT5G16880
     


Gene description


TAIR ID: AT5G16880

Short description: Target of Myb protein 1

Pathogen responsiveness: -0.73

General responsiveness: -1.56

GO biological process


intracellular protein transport, intra-Golgi vesicle-mediated transport


GO cellular component


nucleus, plasma membrane, Golgi stack, intracellular, cytosol


GO molecular function


protein transporter activity


Protein domain


PfamPF03127, GAT domain
PfamPF00790, VHS domain
SMARTSM00288, VHS

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.581.68E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.971.30E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.717.51E-06
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h1.611.69E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.711.59E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.672.03E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.152.29E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.053.07E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.381.14E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.806.70E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.651.52E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.865.00E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.741.14E-12






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