Gene: AT5G15020
     

Gene description


TAIR ID: AT5G15020

Short description: SIN3-like 2

Pathogen responsiveness: -2.69

General responsiveness: -2.61

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, negative regulation of transcription from RNA polymerase II promoter, regulation of transcription, histone deacetylation


GO cellular component


nucleus, chromatin, cytosol, histone deacetylase complex


GO molecular function


RNA polymerase II transcription corepressor activity, histone deacetylase activity


Protein domain


PfamPF16879, C-terminal domain of Sin3a protein
PfamPF08295, Sin3 family co-repressor
PfamPF02671, Paired amphipathic helix repeat
SMARTSM00761, HDAC_interact

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G13450, AT5G13790, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.191.20E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.921.80E-02






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