gene detail

Gene description

TAIR ID: AT5G13880

No short description

Pathogen responsiveness: -1.45

General responsiveness: -1.42

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF05553, Cotton fibre expressed protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250, AT2G47190

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA- view
GSE13739_WT_GO view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	2.65	1.41E-03
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	3.05	5.85E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.45	1.90E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.59	1.69E-06
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	1.87	3.76E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.61	1.62E-06
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	1.54	5.82E-06