Gene: AT5G13800
     


Gene description


TAIR ID: AT5G13800

Short description: pheophytinase

Pathogen responsiveness: -0.72

General responsiveness: -1.03

Orthologous


Rice:

OS06G0354700  

Maize:

GRMZM2G109070  

Wheat: No orthologous gene

GO biological process


chlorophyll catabolic process


GO cellular component


chloroplast stroma, chloroplast thylakoid membrane, chloroplast


GO molecular function


pheophytinase activity, hydrolase activity


Protein domain


PfamPF12697, Alpha/beta hydrolase family

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 6

click to view PPI network

Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.711.37E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.505.41E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.553.44E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.565.69E-08
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.791.61E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.582.07E-12
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.555.02E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.186.32E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.301.78E-13
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.477.48E-15
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.771.04E-17
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.541.94E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.663.09E-08
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.662.06E-04






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