Gene: AT5G09800
     

Gene description


TAIR ID: AT5G09800

Short description: ARM repeat superfamily protein

Pathogen responsiveness: 1.42

General responsiveness: 0.27

Orthologous


Rice:

OS04G0418500  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to chitin, protein ubiquitination


GO cellular component


cytoplasm


GO molecular function


ubiquitin-protein transferase activity, protein binding


Protein domain


PfamPF04564, U-box domain
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT5G22570, AT2G46130, AT5G49450, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


54 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, ERF104 ox, water 4 hCol, ERF104 ox, Flg22 4 h2.021.81E-03
GSE12856Col, WT, controlCol, WT, Bg h2.574.09E-10
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.761.63E-10
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.611.89E-02
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min3.542.44E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.052.64E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min3.651.77E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h2.807.12E-04
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h1.633.60E-02
GSE17464Laer, controlLaer, Flg22 1 h4.002.10E-07
GSE17464Laer, controlLaer, Flg22 2 h2.251.73E-03
GSE17464Penta, controlPenta, Flg22 2 h4.002.11E-07
GSE17464Penta, controlPenta, Flg22 2 h2.418.02E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.126.17E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.221.62E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.164.40E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.621.49E-04
GSE2169Col, WT, waterCol, WT, chitin 30 min1.956.61E-11
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.273.26E-12
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.101.26E-11
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.262.49E-06
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.651.21E-05
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.669.97E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.962.53E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.054.33E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.634.21E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.064.22E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.469.30E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.152.43E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.192.24E-15
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.621.52E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.594.87E-15
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.751.25E-14
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.752.35E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h4.207.20E-06
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.521.06E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.921.33E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.687.21E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h1.931.79E-02
GSE5520Col, WT, control 7 hCol, WT, E.coli_0157_H7 7 h1.941.01E-02
GSE5520Col, WT, control 7 hCol, WT, E.coli_TUV86 flic- 7 h1.602.61E-02
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h1.609.84E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h1.622.19E-07
GSE5615Col, WT, GST 1 hCol, WT, GST+NPP1 1 h1.525.71E-05
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.899.38E-11
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h1.532.09E-05
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h3.009.61E-12
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.751.08E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h1.811.94E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.767.29E-05
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.889.32E-14
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.667.73E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.622.72E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.672.57E-04






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