gene detail

Gene description

TAIR ID: AT5G08790

Short description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TA.28539.1.A1_X_AT

GO biological process

negative regulation of transcription, DNA-templated, regulation of cell size, leaf senescence, response to salicylic acid, response to fungus, response to sucrose, regulation of photomorphogenesis, response to light stimulus, embryo development ending in seed dormancy, response to wounding, response to jasmonic acid, viral process, positive regulation of transcription, transcription, multicellular organism development

GO cellular component

nucleus

GO molecular function

protein binding, DNA binding, protein histidine kinase binding

Protein domain

Pfam	PF02365, No apical meristem (NAM) protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.95	4.12E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.40	5.10E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	1.76	1.07E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	4.66	1.66E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.27	8.57E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	4.28	6.79E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	3.73	2.79E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.68	1.67E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	4.28	4.02E-15
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	4.15	5.20E-15
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.06	4.36E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	4.52	8.34E-16
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.87	1.94E-14
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.42	8.11E-12
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.75	1.46E-12