gene detail

Gene description

TAIR ID: AT5G06520

Short description: SWAP (Suppressor-of-White-APricot)/surp domain-containing protein

Pathogen responsiveness: -1.52

General responsiveness: -4.69

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

RNA processing

GO cellular component

nucleus

GO molecular function

unkown

Protein domain

Pfam	PF01805, Surp module
SMART	SM00648, SWAP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03040: Spliceosome

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

No coexpression gene

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-1.60	4.27E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.68	1.33E-03
GSE67100	pDMR6:GFP GFP-negative, control 7 d	pDMR6:GFP GFP-positive, Hpa Noks1 7 d	5.11	1.00E-02