Gene: AT5G06320
     

Gene description


TAIR ID: AT5G06320

Short description: NDR1/HIN1-like 3

Pathogen responsiveness: 0.80

General responsiveness: 0.12

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response to virus, defense response to bacterium, incompatible interaction, response to salicylic acid, response to wounding, response to bacterium


GO cellular component


Golgi apparatus, plasma membrane, vacuolar membrane, plasmodesma, anchored component of plasma membrane, mitochondrion, integral component of membrane


GO molecular function


signal transducer activity


Protein domain


PfamPF03168, Late embryogenesis abundant protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 360 (Top5%)

click to view PPI network

Differentially expressed condition


42 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.541.07E-05
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.264.92E-11
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d1.671.91E-07
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.172.67E-02
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min1.674.64E-02
GSE17464Laer, controlLaer, Flg22 1 h2.204.07E-06
GSE17464Penta, controlPenta, Flg22 2 h1.933.74E-05
GSE17464Penta, controlPenta, Flg22 2 h1.634.11E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.504.13E-04
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h2.009.28E-12
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.918.41E-06
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.858.55E-06
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.985.87E-06
GSE37921Col, WT, controlCol, WT, CMV1.555.50E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.807.99E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.683.53E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.437.68E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.818.03E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.407.70E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.983.18E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.332.26E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.491.13E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.208.07E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.141.18E-10
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.992.09E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.555.61E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h1.641.40E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.263.63E-09
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h1.579.42E-06
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.852.00E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.544.84E-06
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.543.42E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.931.27E-08
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h1.951.95E-07
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.072.85E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.242.13E-02
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.626.75E-07
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.682.14E-12
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.479.07E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.224.05E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.491.19E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.403.29E-04






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