gene detail

Gene description

TAIR ID: AT5G02270

Short description: non-intrinsic ABC protein 9

Pathogen responsiveness: -1.34

General responsiveness: 0.81

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

response to karrikin, transport

GO cellular component

plasma membrane, cytoplasm, cytosol

GO molecular function

ATPase activity, transporter activity, ATP binding

Protein domain

Pfam	PF00005, ABC transporter
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03018: RNA degradation

Transcriptional regulation

Regulator:
AT5G11260, AT5G41315, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-2.26	2.79E-09
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.53	2.91E-05
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-2.41	3.66E-10
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.12	1.50E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.64	7.28E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-1.75	1.56E-08
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	1.73	3.18E-02
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	1.58	1.52E-02