Gene: AT5G01840
     


Gene description


TAIR ID: AT5G01840

Short description: ovate family protein 1

Pathogen responsiveness: -1.70

General responsiveness: -1.06

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G067376  

Wheat: No orthologous gene

GO biological process


negative regulation of transcription, DNA-templated, regulation of unidimensional cell growth, DNA repair, transcription


GO cellular component


nucleolus, cytoskeleton, nucleus


GO molecular function


DNA binding


Protein domain


PfamPF13724, DNA-binding domain
PfamPF04844, Transcriptional repressor, ovate

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G61850, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 17 (Top10%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.653.77E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.593.85E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.103.32E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.905.36E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.529.29E-07
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h2.062.53E-05






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