gene detail

Gene description

TAIR ID: AT5G01550

Short description: lectin receptor kinase a4.1

Pathogen responsiveness: 2.02

General responsiveness: -0.90

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation, seed germination, abscisic acid-activated signaling pathway

GO cellular component

integral component of membrane, plasma membrane

GO molecular function

ATP binding, kinase activity, protein serine/threonine kinase activity, carbohydrate binding

Protein domain

Pfam	PF00069, Protein kinase domain
Pfam	PF00139, Legume lectin domain
SMART	SM00220, S_TKc

Metabolic pathway

PWY-2161: folate polyglutamylation
PWY-3742: tetrahydrofolate biosynthesis II

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G11260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

67 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, ERF104 ox, water 4 h	Col, ERF104 ox, Flg22 4 h	3.21	1.87E-02
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	3.10	1.14E-02
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	5.10	4.73E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	1.95	9.40E-03
GSE17464	Laer, control	Laer, Flg22 1 h	3.93	6.62E-08
GSE17464	Laer, control	Laer, Flg22 2 h	3.34	3.72E-06
GSE17464	Penta, control	Penta, Flg22 2 h	3.75	1.63E-07
GSE17464	Penta, control	Penta, Flg22 2 h	2.95	2.16E-05
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.07	5.10E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.20	1.55E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.03	4.77E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.74	4.61E-08
GSE2169	Col, WT, water	Col, WT, chitin 30 min	1.93	6.13E-10
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	1.98	2.71E-10
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	1.53	2.11E-08
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	1.51	1.14E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	1.84	4.36E-04
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	2.01	1.81E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	3.72	4.78E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	4.13	1.16E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	3.68	5.34E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.26	1.50E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.69	3.08E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.86	1.66E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.03	7.58E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.79	1.99E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.37	1.60E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	4.06	8.24E-14
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.80	1.30E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.13	3.00E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	5.27	5.35E-15
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.79	1.89E-12
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	3.82	9.60E-06
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	2.97	1.24E-08
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	4.53	6.52E-12
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	2.77	2.35E-08
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	5.03	1.47E-12
GSE5520	Col, WT, control 7 h	Col, WT, E.coli_TUV86 flic- 7 h	1.61	4.49E-03
GSE5520	Col, WT, control 7 h	Col, WT, hrpA- 10 h	1.51	8.41E-03
GSE5520	Col, WT, control 7 h	Col, WT, Cor- hrpA- flic- 7 h	1.55	3.27E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.79	5.70E-05
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	2.34	1.13E-06
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	2.28	1.56E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.83	5.03E-05
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	2.10	2.78E-05
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.83	4.05E-05
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	2.02	4.35E-05
GSE56094	Col, WT, control 2 h	Col, WT, hrpA- 2 h	2.70	1.37E-07
GSE56094	Col, WT, control 3 h	Col, WT, PstDC3000 3 h	1.59	4.05E-03
GSE56094	Col, WT, control 3 h	Col, WT, hrpA- 3 h	2.87	1.58E-08
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	2.31	2.93E-06
GSE56094	Col, WT, control 4 h	Col, WT, hrpA- 4 h	2.00	2.96E-04
GSE56094	Col, WT, control 5 h	Col, WT, hrpA- 5 h	1.97	9.81E-05
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	2.44	1.25E-06
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	2.34	2.20E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	2.42	4.53E-07
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	2.16	7.54E-06
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	3.26	2.64E-09
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.62	1.30E-04
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	3.87	1.95E-11
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.91	2.02E-02
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 HrpA- 12 h	1.59	1.72E-07
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	1.54	2.52E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.97	3.26E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	3.07	7.17E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	2.32	2.44E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	2.98	1.02E-04