Gene: AT4G37950
     

Gene description


TAIR ID: AT4G37950

Short description: Rhamnogalacturonate lyase family protein

Pathogen responsiveness: -1.50

General responsiveness: -4.20

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


carbohydrate metabolic process


GO cellular component


extracellular region


GO molecular function


carbohydrate binding, lyase activity


Protein domain


PfamPF14683, Polysaccharide lyase family 4, domain III
PfamPF14686, Polysaccharide lyase family 4, domain II
PfamPF06045, Rhamnogalacturonate lyase family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G27920, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-5.328.71E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h-2.223.23E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.162.42E-02






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